Installation

pyrpipe is available through bioconda could be installed via:

conda install -c bioconda pyrpipe

pyrpipe is available on PyPI and could be installed via pip:

pip install pyrpipe

To install from source, clone the git repo:

git clone https://github.com/urmi-21/pyrpipe

Then install using pip:

pip install -r pyrpipe/requirements.txt
pip install -e pyrpipe

To run tests using pytest, from the pyrpipe root perform:

py.test
#or
py.test tests/<specific test file>